I am new to NXJ and didn't have enough time to review the code . Does each
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See below a quotation of http://nxt.natulte.net/trac/wiki/ElectricStorm the libnxt library/bootloader primary source...
The main problem is that the SAM-BA firmware flashing utility, while useful, puts the flash chip under a lot of stress : the lock bits, which let firmwares write-protect themselves, are only guaranteed for about a hundred toggles. Each SAM-BA firmware flash results in two toggles of the lock bits of the first two pages of flash memory.